miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Species belonging to selected taxon:
Carthamus tinctorius
ABOUT THIS RECORD
ID:
MNEST045698
species:
Carthamus tinctorius
source:
microPC, original name:
miR156
Taxonomy by NCBI:
Carthamus tinctorius
Carthamus
Centaureinae
Cardueae
Carduoideae
Asteraceae
Asterales
campanulids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CAGAAGAGAGTGAGCAC
miRNA*
GCTCACTGCTCTATCTG
mismatches:
0
bulges:
2
View larger
pre-miRNA
CAGAAGAGAGTGAGCAC
ACAAAGGCAAATTATACCCAAGAGTCTTGTATGATTGTTTTGGGT
GCTCACTGCTCTATCTG
dot-bracket secondary structure
(((((((((((((((((
...(((((((.((((((...........)))))))))))))..))
))))))).)))).))))
SIMILARITIES
miRBase
ath-MIR156a
:
0.00000001
PMRD
ath-miR156a
:
0.00000001
microPC
miR156
:
1e-39
UniProt
no hits
RFAM
mir-156: 0.0000003
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
download this record